TAP MADS_MIKC in Eragrostis tef

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Protein source: Tef Improvement Project


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SRF-TF
K-box

(Domain names are clickable)



List of proteins (52)

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nameClick button to show/hide sequence: Download sequence?
augustus_masked-scaffold2163-abinit-gene-0.7-mRNA-1
augustus_masked-scaffold2847-abinit-gene-3.5-mRNA-1
augustus_masked-scaffold358-abinit-gene-0.1-mRNA-1
augustus_masked-scaffold4187-abinit-gene-0.1-mRNA-1
augustus_masked-scaffold4241-abinit-gene-0.6-mRNA-1
maker-scaffold10960-snap-gene-2.28-mRNA-1
maker-scaffold11585-snap-gene-0.23-mRNA-1
maker-scaffold1229-snap-gene-0.37-mRNA-1
maker-scaffold1300-snap-gene-3.50-mRNA-1
maker-scaffold1301-augustus-gene-1.26-mRNA-1
maker-scaffold1372-augustus-gene-1.43-mRNA-1
maker-scaffold1376-augustus-gene-1.33-mRNA-1
maker-scaffold1536-snap-gene-2.52-mRNA-1
maker-scaffold1811-augustus-gene-0.28-mRNA-1
maker-scaffold1913-augustus-gene-1.40-mRNA-1
maker-scaffold2013-augustus-gene-0.16-mRNA-1
maker-scaffold2025-augustus-gene-3.31-mRNA-1
maker-scaffold2025-snap-gene-1.58-mRNA-1
maker-scaffold2155-augustus-gene-0.18-mRNA-1
maker-scaffold2232-augustus-gene-0.15-mRNA-1
maker-scaffold2397-augustus-gene-0.27-mRNA-1
maker-scaffold2583-augustus-gene-1.20-mRNA-1
maker-scaffold2622-snap-gene-0.17-mRNA-1
maker-scaffold2628-snap-gene-0.45-mRNA-1
maker-scaffold3022-snap-gene-0.21-mRNA-1
maker-scaffold3091-snap-gene-2.44-mRNA-1
maker-scaffold3096-augustus-gene-1.55-mRNA-1
maker-scaffold3123-snap-gene-1.35-mRNA-1
maker-scaffold3167-snap-gene-0.56-mRNA-1
maker-scaffold3234-augustus-gene-0.55-mRNA-1
maker-scaffold3265-snap-gene-0.38-mRNA-1
maker-scaffold3267-snap-gene-0.30-mRNA-1
maker-scaffold3435-augustus-gene-1.39-mRNA-1
maker-scaffold4027-augustus-gene-1.21-mRNA-1
maker-scaffold4500-snap-gene-0.48-mRNA-1
maker-scaffold462-snap-gene-0.28-mRNA-1
maker-scaffold501-snap-gene-0.22-mRNA-1
maker-scaffold504-augustus-gene-1.26-mRNA-1
maker-scaffold605-augustus-gene-1.21-mRNA-1
maker-scaffold6192-snap-gene-1.35-mRNA-1
maker-scaffold7232-augustus-gene-0.26-mRNA-1
maker-scaffold8466-augustus-gene-0.34-mRNA-1
maker-scaffold8478-augustus-gene-0.39-mRNA-1
maker-scaffold9749-snap-gene-0.12-mRNA-1
snap_masked-scaffold1628-abinit-gene-1.22-mRNA-1
snap_masked-scaffold3116-abinit-gene-2.20-mRNA-1
snap_masked-scaffold3267-abinit-gene-3.7-mRNA-1
snap_masked-scaffold426-abinit-gene-1.26-mRNA-1
snap_masked-scaffold4342-abinit-gene-1.23-mRNA-1
snap_masked-scaffold5147-abinit-gene-0.20-mRNA-1
snap_masked-scaffold5167-abinit-gene-0.14-mRNA-1
snap_masked-scaffold7317-abinit-gene-0.5-mRNA-1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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